RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g51000.1 View Network Show in Genome Browser |
| Other Names | Os03g0719300 |
| Description | 3,4-dihydroxy-2-butanone kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 29137663-29145552 Nucleotide Length: 1878 |
| Protein-coding | LOC_Os03g51000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62870 LOC_Os01g43030 LOC_Os03g39710 LOC_Os01g38670 LOC_Os01g62860 LOC_Os01g74000 LOC_Os01g38680 LOC_Os02g47940 LOC_Os01g40470 LOC_Os01g62880 LOC_Os02g07060 More.. |
| Downstream Genes | LOC_Os10g41930 LOC_Os09g10850 LOC_Os09g20820 LOC_Os12g40880 LOC_Os12g43590 LOC_Os05g38230 LOC_Os09g24230 LOC_Os05g43560 LOC_Os06g01990 LOC_Os08g12760 LOC_Os04g51940 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | P185-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g51000.1 |
| Rice Genome Annotation | LOC_Os03g51000.1 |
| Ricechip | LOC_Os03g51000.1 |
| KEGG | osa:4333926 dosa:Os03t0719300-01 |
| Entrez-Gene | 4333926 |