RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g51140.1 View Network Show in Genome Browser |
| Other Names | Os03g0721200 |
| Description | HEAT repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 29260530-29272294 Nucleotide Length: 3621 |
| Protein-coding | LOC_Os03g51140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g58020 LOC_Os03g40400 LOC_Os02g06592 LOC_Os02g05340 LOC_Os03g44310 LOC_Os01g60040 LOC_Os01g60440 LOC_Os02g32030 LOC_Os01g67134 LOC_Os02g22780 LOC_Os01g18860 More.. |
| Downstream Genes | LOC_Os11g04220 LOC_Os07g38760 LOC_Os04g59494 LOC_Os12g31380 LOC_Os04g02820 LOC_Os09g30418 LOC_Os09g30412 LOC_Os04g51630 LOC_Os10g31864 LOC_Os08g39140 LOC_Os08g12820 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g51140.1 |
| Rice Genome Annotation | LOC_Os03g51140.1 |
| Ricechip | LOC_Os03g51140.1 |
| KEGG | osa:4333935 dosa:Os03t0721200-01 |
| Entrez-Gene | 4333935 |