RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g51230.1 View Network Show in Genome Browser |
| Other Names | Os03g0722400 |
| Description | SNF2 family N-terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 29305420-29311726 Nucleotide Length: 2550 |
| Protein-coding | LOC_Os03g51230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g19480 LOC_Os03g06670 LOC_Os03g25450 LOC_Os01g59110 LOC_Os01g53420 LOC_Os01g53380 LOC_Os01g53350 |
| Downstream Genes | LOC_Os07g32390 LOC_Os07g14830 LOC_Os06g16390 LOC_Os10g18530 LOC_Os09g34230 LOC_Os08g38160 LOC_Os07g13800 LOC_Os06g18790 LOC_Os05g42060 LOC_Os04g44354 LOC_Os03g60960 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1862e |
| Reference | |
|---|---|
| PubMed | 22915302 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g51230.1 |
| Rice Genome Annotation | LOC_Os03g51230.1 |
| Ricechip | LOC_Os03g51230.1 |
| KEGG | osa:4333943 dosa:Os03t0722400-00 |
| Entrez-Gene | 4333943 |