RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g51510.3 View Network Show in Genome Browser |
| Other Names | Os03g0725000 |
| Description | ribosomal protein L6, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 29462922-29465818 Nucleotide Length: 312 |
| Protein-coding | LOC_Os03g51510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g15290 LOC_Os03g48840 LOC_Os03g07340 LOC_Os02g27760 LOC_Os03g03360 LOC_Os02g46440 LOC_Os02g15610 LOC_Os03g34040 LOC_Os02g01230 LOC_Os02g14059 LOC_Os01g10820 More.. |
| Downstream Genes | LOC_Os03g61260 LOC_Os07g10720 LOC_Os11g04370 LOC_Os07g10660 LOC_Os06g46930 LOC_Os08g15460 LOC_Os12g42180 LOC_Os03g59310 LOC_Os10g41050 LOC_Os05g33020 LOC_Os08g21840 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2873c |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g51510.3 |
| Rice Genome Annotation | LOC_Os03g51510.3 |
| Ricechip | LOC_Os03g51510.3 |
| KEGG | osa:4333960 dosa:Os03t0725000-01 |
| Entrez-Gene | 4333960 |