RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g51550.2 View Network Show in Genome Browser |
| Other Names | Os03g0725400 |
| Description | WD repeat-containing protein 5, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 29486017-29490549 Nucleotide Length: 975 |
| Protein-coding | LOC_Os03g51550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005654 | nucleoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g10990 LOC_Os01g62350 LOC_Os01g64640 LOC_Os02g57220 LOC_Os02g56130 LOC_Os03g49200 LOC_Os03g43890 LOC_Os01g19840 LOC_Os01g04910 LOC_Os03g49210 LOC_Os02g32160 More.. |
| Downstream Genes | LOC_Os05g46570 LOC_Os04g48060 LOC_Os05g38520 LOC_Os07g40030 LOC_Os11g05730 LOC_Os06g06510 LOC_Os06g06460 LOC_Os05g36280 LOC_Os04g34240 LOC_Os12g03822 LOC_Os11g03990 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g51550.2 |
| Rice Genome Annotation | LOC_Os03g51550.2 |
| Ricechip | LOC_Os03g51550.2 |
| KEGG | osa:4333964 dosa:Os03t0725400-01 |
| Entrez-Gene | 4333964 |