RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g51600.2 View Network Show in Genome Browser |
| Other Names | Os03g0726100 |
| Description | tubulin/FtsZ domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 29526111-29529118 Nucleotide Length: 1302 |
| Protein-coding | LOC_Os03g51600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51380 LOC_Os02g01010 LOC_Os03g45920 LOC_Os02g07060 LOC_Os01g49190 LOC_Os01g59150 LOC_Os01g18050 LOC_Os03g01530 LOC_Os02g07490 LOC_Os03g44484 LOC_Os03g06670 More.. |
| Downstream Genes | LOC_Os06g37180 LOC_Os09g08910 LOC_Os11g09280 LOC_Os11g14220 LOC_Os03g56810 LOC_Os06g46000 LOC_Os05g34170 LOC_Os12g08260 LOC_Os05g01500 LOC_Os07g38730 LOC_Os04g46620 More.. |
| Reference | |
|---|---|
| PubMed | 10889249 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g51600.2 |
| Rice Genome Annotation | LOC_Os03g51600.2 |
| Ricechip | LOC_Os03g51600.2 |
| KEGG | osa:4333966 dosa:Os03t0726100-01 |
| Entrez-Gene | 4333966 |