RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g51840.1 View Network Show in Genome Browser |
| Other Names | Os03g0728200 |
| Description | PPR repeat containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 29730344-29732399 Nucleotide Length: 1806 |
| Protein-coding | LOC_Os03g51840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27730 LOC_Os03g22890 LOC_Os01g53150 LOC_Os03g13000 LOC_Os03g44530 |
| Downstream Genes | LOC_Os12g42370 LOC_Os05g35540 LOC_Os11g41910 LOC_Os11g47800 LOC_Os07g47300 LOC_Os07g43470 LOC_Os05g28940 LOC_Os08g09940 LOC_Os05g49220 LOC_Os03g56840 LOC_Os12g09570 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00480 rn00720 rn01100 rn01120 |
| Metacyc Pathways | TCA ANARESP1-PWY P105-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g51840.1 |
| Rice Genome Annotation | LOC_Os03g51840.1 |
| Ricechip | LOC_Os03g51840.1 |
| KEGG | osa:4333980 dosa:Os03t0728200-00 |
| Entrez-Gene | 4333980 |