RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g51880.1 View Network Show in Genome Browser |
| Other Names | Os03g0728600 |
| Description | GA15368-PA, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 29745634-29747861 Nucleotide Length: 420 |
| Protein-coding | LOC_Os03g51880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g55410 LOC_Os01g07260 |
| Downstream Genes | LOC_Os05g14590 LOC_Os10g28230 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5513 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g51880.1 |
| Rice Genome Annotation | LOC_Os03g51880.1 |
| Ricechip | LOC_Os03g51880.1 |
| KEGG | osa:4333982 dosa:Os03t0728600-01 |
| Entrez-Gene | 4333982 |