RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g51900.1 View Network Show in Genome Browser |
| Other Names | Os03g0728800 |
| Description | DEAD-box ATP-dependent RNA helicase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 29766132-29774184 Nucleotide Length: 2013 |
| Protein-coding | LOC_Os03g51900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22350 LOC_Os03g49210 LOC_Os01g08770 LOC_Os03g22320 LOC_Os03g19960 LOC_Os03g22880 LOC_Os01g34200 LOC_Os02g37870 LOC_Os01g59500 LOC_Os01g13730 LOC_Os02g26850 More.. |
| Downstream Genes | LOC_Os10g35280 LOC_Os04g43140 LOC_Os12g29660 LOC_Os07g29320 LOC_Os12g04010 LOC_Os11g04200 LOC_Os05g05220 LOC_Os07g34740 LOC_Os05g48422 LOC_Os07g20580 LOC_Os03g61560 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00230 rn00680 rn00250 rn01100 |
| Metacyc Pathways | DENOVOPURINE2-PWY PWY-841 P121-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g51900.1 |
| Rice Genome Annotation | LOC_Os03g51900.1 |
| Ricechip | LOC_Os03g51900.1 |
| KEGG | osa:4333983 dosa:Os03t0728800-01 |
| Entrez-Gene | 4333983 |