RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g51970.1 View Network Show in Genome Browser |
| Other Names | Os03g0729500 |
| Description | growth-regulating factor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 29823449-29825818 Nucleotide Length: 1371 |
| Protein-coding | LOC_Os03g51970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01530 |
| Downstream Genes | LOC_Os06g46250 LOC_Os05g40820 LOC_Os04g46620 LOC_Os12g01370 LOC_Os11g01340 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR396d osa-miR396g osa-miR396h osa-miR396e-5p osa-miR396a-5p osa-miR396b-5p osa-miR396c-5p
|
| Database Links | |
|---|---|
| Gramene | LOC_Os03g51970.1 |
| Rice Genome Annotation | LOC_Os03g51970.1 |
| Ricechip | LOC_Os03g51970.1 |
| KEGG | osa:4333990 dosa:Os03t0729500-01 |
| Entrez-Gene | 4333990 |