RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g51984.1 View Network Show in Genome Browser |
| Other Names | Os03g0729700 |
| Description | differentiation protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 29828701-29831679 Nucleotide Length: 876 |
| Protein-coding | LOC_Os03g51984 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g56040 LOC_Os03g12236 LOC_Os01g33800 LOC_Os01g22010 LOC_Os01g18860 LOC_Os02g10180 LOC_Os02g09590 LOC_Os01g10940 LOC_Os02g13360 LOC_Os01g37560 LOC_Os01g53020 More.. |
| Downstream Genes | LOC_Os07g27790 LOC_Os05g03820 LOC_Os05g41800 LOC_Os08g29900 LOC_Os08g23320 LOC_Os08g29970 LOC_Os08g29910 LOC_Os12g17070 LOC_Os08g29950 LOC_Os08g43490 LOC_Os06g04270 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00380 rn00624 rn01120 rn00340 rn00350 rn00130 rn01100 rn01110 |
| Metacyc Pathways | PWY-4021 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g51984.1 |
| Rice Genome Annotation | LOC_Os03g51984.1 |
| Ricechip | LOC_Os03g51984.1 |
| KEGG | osa:4333992 dosa:Os03t0729700-01 |
| Entrez-Gene | 4333992 |