RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g52170.1 View Network Show in Genome Browser
Other Names	Os03g0731900,Os03g0731850
Description	4-hydroxy-3-methylbut-2-enyl diphosphate reductase, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 29950011-29953906 Nucleotide Length: 1380
Protein-coding	LOC_Os03g52170

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0006629	lipid metabolic	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0009536	plastid	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g53770 LOC_Os01g48690 LOC_Os03g38730 LOC_Os02g04750
Downstream Genes	LOC_Os03g58710 LOC_Os04g09604 LOC_Os11g18366 LOC_Os11g35710 LOC_Os11g18194 LOC_Os05g14800

Pathways
KEGG Pathways	rn00900 rn01110 rn01100
Metacyc Pathways	NONMEVIPP-PWY

Database Links
Gramene	LOC_Os03g52170.1
Rice Genome Annotation	LOC_Os03g52170.1
Ricechip	LOC_Os03g52170.1
KEGG	osa:4334003 dosa:Os03t0731900-01 dosa:Os03t0731850-00
Entrez-Gene	4334003