RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g52320.1 View Network Show in Genome Browser |
| Other Names | Os03g0733600 |
| Description | GRF-interacting factor 1, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 30045079-30047237 Nucleotide Length: 684 |
| Protein-coding | LOC_Os03g52320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53690 LOC_Os02g36924 LOC_Os02g49840 LOC_Os02g45770 LOC_Os01g22710 LOC_Os01g10504 LOC_Os02g52340 LOC_Os02g57980 LOC_Os01g66290 LOC_Os03g11614 LOC_Os03g08754 More.. |
| Downstream Genes | LOC_Os10g30640 LOC_Os08g33488 LOC_Os07g01820 LOC_Os03g54160 LOC_Os10g31900 LOC_Os09g12800 LOC_Os07g19560 LOC_Os07g41370 LOC_Os04g23910 LOC_Os07g37510 LOC_Os04g53930 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR393a osa-miR393b-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g52320.1 |
| Rice Genome Annotation | LOC_Os03g52320.1 |
| Ricechip | LOC_Os03g52320.1 |
| KEGG | osa:4334010 dosa:Os03t0733600-01 |
| Entrez-Gene | 4334010 |