RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g52340.1 View Network Show in Genome Browser |
| Other Names | Os03g0733800 |
| Description | endoplasmic oxidoreductin-1 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 30062334-30066156 Nucleotide Length: 1425 |
| Protein-coding | LOC_Os03g52340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70140 LOC_Os02g44500 LOC_Os03g08280 LOC_Os02g20394 LOC_Os03g44620 LOC_Os01g13760 LOC_Os03g18690 LOC_Os02g01010 LOC_Os02g52360 LOC_Os02g04320 LOC_Os01g08970 More.. |
| Downstream Genes | LOC_Os04g56646 LOC_Os07g25420 LOC_Os05g48810 LOC_Os09g33780 LOC_Os11g18170 LOC_Os03g63430 LOC_Os08g43640 LOC_Os07g49150 LOC_Os09g37000 LOC_Os12g08740 LOC_Os04g46960 More.. |
| Reference | |
|---|---|
| PubMed | 19666483 22050533 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g52340.1 |
| Rice Genome Annotation | LOC_Os03g52340.1 |
| Ricechip | LOC_Os03g52340.1 |
| KEGG | osa:4334011 dosa:Os03t0733800-00 |
| Entrez-Gene | 4334011 |