RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g52660.1 View Network Show in Genome Browser |
| Other Names | Os03g0736600 |
| Description | ATP synthase F1, delta subunit family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 30197260-30199278 Nucleotide Length: 630 |
| Protein-coding | LOC_Os03g52660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g14040 LOC_Os03g48471 LOC_Os01g08350 LOC_Os03g17070 LOC_Os01g25600 LOC_Os03g21560 LOC_Os01g48300 LOC_Os01g05080 |
| Downstream Genes | LOC_Os12g23630 LOC_Os10g21240 LOC_Os09g08910 LOC_Os09g08880 LOC_Os04g16740 LOC_Os05g41190 LOC_Os08g42850 LOC_Os07g32880 LOC_Os10g17280 LOC_Os06g49160 LOC_Os10g21230 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g52660.1 |
| Rice Genome Annotation | LOC_Os03g52660.1 |
| Ricechip | LOC_Os03g52660.1 |
| KEGG | osa:4334032 dosa:Os03t0736600-01 |
| Entrez-Gene | 4334032 |