RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g52690.1 View Network Show in Genome Browser |
| Other Names | Os03g0737000 |
| Description | CBS domain containing membrane protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 30206350-30210288 Nucleotide Length: 693 |
| Protein-coding | LOC_Os03g52690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g27030 LOC_Os01g01340 LOC_Os02g42640 LOC_Os02g06410 LOC_Os01g40420 LOC_Os03g47120 LOC_Os02g35190 LOC_Os02g06360 LOC_Os03g39640 LOC_Os03g31490 LOC_Os02g16680 More.. |
| Downstream Genes | LOC_Os10g35670 LOC_Os04g31340 LOC_Os11g44810 LOC_Os03g63940 LOC_Os09g26190 LOC_Os04g24600 LOC_Os12g25200 LOC_Os04g55210 LOC_Os05g32850 LOC_Os03g55670 LOC_Os10g10500 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00290 rn00660 rn01100 rn01110 rn01210 |
| Metacyc Pathways | ILEUSYN-PWY VALSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g52690.1 |
| Rice Genome Annotation | LOC_Os03g52690.1 |
| Ricechip | LOC_Os03g52690.1 |
| KEGG | osa:4334035 dosa:Os03t0737000-03 |
| Entrez-Gene | 4334035 |