RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g53100.1 View Network Show in Genome Browser |
| Other Names | Os03g0742300 |
| Description | response regulator receiver domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 30451518-30452854 Nucleotide Length: 384 |
| Protein-coding | LOC_Os03g53100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72330 LOC_Os03g49500 LOC_Os02g40510 |
| Downstream Genes | LOC_Os12g04500 LOC_Os11g04720 LOC_Os09g36220 LOC_Os11g05930 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g53100.1 |
| Rice Genome Annotation | LOC_Os03g53100.1 |
| Ricechip | LOC_Os03g53100.1 |
| KEGG | osa:4334066 dosa:Os03t0742300-01 |
| Entrez-Gene | 4334066 |