RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g53270.1 View Network Show in Genome Browser |
| Other Names | Os03g0744600 |
| Description | stem-specific protein TSJT1, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 30560706-30563692 Nucleotide Length: 756 |
| Protein-coding | LOC_Os03g53270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01332 LOC_Os01g09000 |
| Downstream Genes | LOC_Os12g23150 LOC_Os09g08660 LOC_Os10g22380 LOC_Os04g41340 LOC_Os04g35480 LOC_Os05g08990 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g53270.1 |
| Rice Genome Annotation | LOC_Os03g53270.1 |
| Ricechip | LOC_Os03g53270.1 |
| KEGG | osa:4334077 dosa:Os03t0744600-01 |
| Entrez-Gene | 4334077 |