RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g53600.1 View Network Show in Genome Browser |
| Other Names | Os03g0747300 |
| Description | HTH DNA-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 30736467-30740258 Nucleotide Length: 849 |
| Protein-coding | LOC_Os03g53600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g43820 |
| Downstream Genes | LOC_Os04g46240 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR818a osa-miR818b osa-miR818c osa-miR818d osa-miR818e |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g53600.1 |
| Rice Genome Annotation | LOC_Os03g53600.1 |
| Ricechip | LOC_Os03g53600.1 |
| KEGG | osa:4334096 dosa:Os03t0747300-01 |
| Entrez-Gene | 4334096 |