RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g53670.1 View Network Show in Genome Browser |
| Other Names | Os03g0748000 |
| Description | YT521-B-like family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 30777720-30781832 Nucleotide Length: 1986 |
| Protein-coding | LOC_Os03g53670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g18800 LOC_Os02g39720 |
| Downstream Genes | LOC_Os07g44290 LOC_Os05g04550 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g53670.1 |
| Rice Genome Annotation | LOC_Os03g53670.1 |
| Ricechip | LOC_Os03g53670.1 |
| KEGG | osa:4334103 dosa:Os03t0748000-01 |
| Entrez-Gene | 4334103 |