RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g53710.1 View Network Show in Genome Browser |
| Other Names | Os03g0748300 |
| Description | aldose 1-epimerase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 30796483-30798275 Nucleotide Length: 1236 |
| Protein-coding | LOC_Os03g53710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0030246 | carbohydrate binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g26430 LOC_Os01g72340 LOC_Os02g43600 LOC_Os03g50810 LOC_Os03g03020 LOC_Os01g48690 LOC_Os02g42380 LOC_Os01g42280 LOC_Os01g04900 LOC_Os03g36540 LOC_Os03g14040 More.. |
| Downstream Genes | LOC_Os03g61030 LOC_Os09g17630 LOC_Os08g25900 LOC_Os09g15820 LOC_Os04g38530 LOC_Os11g32260 LOC_Os06g13650 LOC_Os03g55970 LOC_Os05g47850 LOC_Os09g26810 LOC_Os06g45340 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g53710.1 |
| Rice Genome Annotation | LOC_Os03g53710.1 |
| Ricechip | LOC_Os03g53710.1 |
| KEGG | osa:4334106 dosa:Os03t0748300-01 |
| Entrez-Gene | 4334106 |