RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g53750.2 View Network Show in Genome Browser |
| Other Names | Os03g0748700 |
| Description | nuclear prelamin A recognition factor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 30810265-30814716 Nucleotide Length: 1185 |
| Protein-coding | LOC_Os03g53750 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g27960 |
| Downstream Genes | LOC_Os04g50864 LOC_Os07g01930 LOC_Os09g16910 LOC_Os06g03770 LOC_Os04g55940 LOC_Os03g56410 LOC_Os09g26650 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5788 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g53750.2 |
| Rice Genome Annotation | LOC_Os03g53750.2 |
| Ricechip | LOC_Os03g53750.2 |
| KEGG | osa:4334110 dosa:Os03t0748700-01 |
| Entrez-Gene | 4334110 |