RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g53890.1 View Network Show in Genome Browser |
| Other Names | Os03g0749900 |
| Description | N2, N2-dimethylguanosine tRNA methyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 30900069-30902209 Nucleotide Length: 726 |
| Protein-coding | LOC_Os03g53890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g35060 LOC_Os02g50990 LOC_Os01g37560 LOC_Os02g05330 LOC_Os01g67134 LOC_Os01g01700 LOC_Os02g32030 LOC_Os01g46950 |
| Downstream Genes | LOC_Os03g60920 LOC_Os05g39050 LOC_Os06g06730 LOC_Os12g41830 LOC_Os04g51400 LOC_Os06g12560 LOC_Os10g39770 LOC_Os06g48750 LOC_Os06g50370 LOC_Os12g18880 LOC_Os05g30130 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-4021 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g53890.1 |
| Rice Genome Annotation | LOC_Os03g53890.1 |
| Ricechip | LOC_Os03g53890.1 |
| KEGG | osa:4334118 dosa:Os03t0749900-01 |
| Entrez-Gene | 4334118 |