RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g53900.1 View Network Show in Genome Browser |
| Other Names | Os03g0750000 |
| Description | universal stress protein domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 30901299-30903033 Nucleotide Length: 561 |
| Protein-coding | LOC_Os03g53900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g70400 LOC_Os02g54590 LOC_Os02g12660 LOC_Os02g53400 LOC_Os03g51030 LOC_Os02g16680 LOC_Os03g17660 LOC_Os02g07840 |
| Downstream Genes | LOC_Os12g31710 LOC_Os08g15060 LOC_Os03g62340 LOC_Os06g37620 LOC_Os05g37830 LOC_Os04g21320 LOC_Os09g23540 LOC_Os09g35800 LOC_Os06g40640 LOC_Os05g28090 LOC_Os10g35670 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1847.1 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g53900.1 |
| Rice Genome Annotation | LOC_Os03g53900.1 |
| Ricechip | LOC_Os03g53900.1 |
| KEGG | osa:4334119 dosa:Os03t0750000-01 |
| Entrez-Gene | 4334119 |