RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g53910.1 View Network Show in Genome Browser |
| Other Names | Os03g0750100 |
| Description | tetratricopeptide repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 30903859-30907128 Nucleotide Length: 1125 |
| Protein-coding | LOC_Os03g53910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g43020 LOC_Os01g07080 LOC_Os02g52360 LOC_Os01g51620 LOC_Os01g70570 LOC_Os02g51730 LOC_Os03g13370 LOC_Os01g43030 LOC_Os01g34200 LOC_Os03g49210 LOC_Os03g22880 More.. |
| Downstream Genes | LOC_Os10g31520 LOC_Os06g11320 LOC_Os04g45480 LOC_Os07g47420 LOC_Os07g16950 LOC_Os08g39080 LOC_Os06g41750 LOC_Os07g29360 LOC_Os09g30418 LOC_Os09g30412 LOC_Os10g25110 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g53910.1 |
| Rice Genome Annotation | LOC_Os03g53910.1 |
| Ricechip | LOC_Os03g53910.1 |
| KEGG | osa:4334120 dosa:Os03t0750100-00 |
| Entrez-Gene | 4334120 |