RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g54100.2 View Network Show in Genome Browser |
| Other Names | Os03g0752300 |
| Description | potassium channel protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31014832-31017449 Nucleotide Length: 1044 |
| Protein-coding | LOC_Os03g54100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g07830 LOC_Os03g53720 LOC_Os02g54760 LOC_Os02g41710 LOC_Os03g44440 LOC_Os02g14840 LOC_Os01g55200 LOC_Os02g15580 LOC_Os01g20160 LOC_Os03g17700 LOC_Os02g53340 More.. |
| Downstream Genes | LOC_Os04g51820 LOC_Os12g06570 LOC_Os06g08850 LOC_Os09g38580 LOC_Os04g55080 LOC_Os12g28260 LOC_Os04g51830 LOC_Os06g33570 LOC_Os06g06090 LOC_Os06g48810 LOC_Os06g10580 More.. |
| Reference | |
|---|---|
| PubMed | 21224427 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g54100.2 |
| Rice Genome Annotation | LOC_Os03g54100.2 |
| Ricechip | LOC_Os03g54100.2 |
| KEGG | osa:4334137 dosa:Os03t0752300-01 |
| Entrez-Gene | 4334137 |