RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g54230.1 View Network Show in Genome Browser |
| Other Names | |
| Description | imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31091207-31091683 Nucleotide Length: 477 |
| Protein-coding | LOC_Os03g54230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15120 LOC_Os01g16940 LOC_Os01g13190 LOC_Os03g04169 LOC_Os02g47940 LOC_Os03g20630 LOC_Os01g59750 LOC_Os01g31680 |
| Downstream Genes | LOC_Os04g52710 LOC_Os05g33260 LOC_Os06g45660 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g54230.1 |
| Rice Genome Annotation | LOC_Os03g54230.1 |
| Ricechip | LOC_Os03g54230.1 |