RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g54240.1 View Network Show in Genome Browser |
| Other Names | Os03g0754200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31094255-31097656 Nucleotide Length: 327 |
| Protein-coding | LOC_Os03g54240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01730 LOC_Os03g13010 |
| Downstream Genes | LOC_Os09g26390 LOC_Os04g48460 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2102-5p |
| Pathways | |
|---|---|
| KEGG Pathways | rn00010 rn00051 rn00562 rn00710 rn01100 rn01110 rn01120 |
| Metacyc Pathways | ANAEROFRUCAT-PWY PWY-1042 CALVIN-PWY PWY-3801 GLYCOLYSIS |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g54240.1 |
| Rice Genome Annotation | LOC_Os03g54240.1 |
| Ricechip | LOC_Os03g54240.1 |
| KEGG | osa:4334145 dosa:Os03t0754200-02 |
| Entrez-Gene | 4334145 |