RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g54770.3 View Network Show in Genome Browser |
| Other Names | Os03g0754900 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31134469-31139712 Nucleotide Length: 744 |
| Protein-coding | LOC_Os03g54770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g17010 LOC_Os01g34614 LOC_Os02g04480 LOC_Os03g22570 LOC_Os02g12850 LOC_Os02g39890 LOC_Os03g05260 LOC_Os03g50090 LOC_Os03g18720 LOC_Os03g38960 LOC_Os03g50850 More.. |
| Downstream Genes | LOC_Os12g44390 LOC_Os05g05860 LOC_Os05g04850 LOC_Os06g48230 LOC_Os09g39590 LOC_Os03g59710 LOC_Os04g39444 LOC_Os06g21470 LOC_Os08g05530 LOC_Os06g14190 LOC_Os05g24970 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g54770.3 |
| Rice Genome Annotation | LOC_Os03g54770.3 |
| Ricechip | LOC_Os03g54770.3 |
| KEGG | osa:4334149 dosa:Os03t0754900-02 |
| Entrez-Gene | 4334149 |