RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g54780.1 View Network Show in Genome Browser |
| Other Names | Os03g0755000 |
| Description | STE_PAK_Ste20_KHSh_GCKh_HPKh.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31140050-31148974 Nucleotide Length: 2520 |
| Protein-coding | LOC_Os03g54780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g46650 LOC_Os02g04660 LOC_Os03g17700 LOC_Os02g05630 LOC_Os02g14780 LOC_Os02g15594 LOC_Os02g55560 LOC_Os03g13170 LOC_Os02g04240 LOC_Os02g02840 LOC_Os03g18150 More.. |
| Downstream Genes | LOC_Os05g43570 LOC_Os06g06090 LOC_Os06g33549 LOC_Os07g32380 LOC_Os04g37904 LOC_Os06g48300 LOC_Os11g10100 LOC_Os04g56450 LOC_Os05g26890 LOC_Os09g39500 LOC_Os05g28290 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g54780.1 |
| Rice Genome Annotation | LOC_Os03g54780.1 |
| Ricechip | LOC_Os03g54780.1 |
| KEGG | osa:4334150 dosa:Os03t0755000-01 |
| Entrez-Gene | 4334150 |