RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g54860.1 View Network Show in Genome Browser
Other Names	Os03g0755700,Os03g0755625
Description	60S ribosomal protein L13a-2, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 31180590-31190830 Nucleotide Length: 399
Protein-coding	LOC_Os03g54860

Gene Ontology Classification
GO	Name	Type	Code
GO:0006412	translation	Biological Process	IEA
GO:0006412	translation	Biological Process	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005198	structural molecule activity	Molecular Function	IEA
GO:0005198	structural molecule activity	Molecular Function	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005840	ribosome	Cellular Component	IEA
GO:0005840	ribosome	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g49180 LOC_Os03g18410 LOC_Os03g38960 LOC_Os03g22180 LOC_Os03g08440 LOC_Os02g33140 LOC_Os02g06700 LOC_Os02g01540 LOC_Os03g05980 LOC_Os03g26229 LOC_Os01g55890 More..
Downstream Genes	LOC_Os12g03090 LOC_Os11g03400 LOC_Os11g08940 LOC_Os12g07980 LOC_Os09g02284 LOC_Os05g06310 LOC_Os07g47780 LOC_Os07g27930 LOC_Os07g42450 LOC_Os08g32990 LOC_Os11g38959 More..

Database Links
Gramene	LOC_Os03g54860.1
Rice Genome Annotation	LOC_Os03g54860.1
Ricechip	LOC_Os03g54860.1
KEGG	osa:4334152 dosa:Os03t0755700-00 dosa:Os03t0755625-00
Entrez-Gene	4334152