RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g54890.1 View Network Show in Genome Browser |
| Other Names | Os03g0756000 |
| Description | ribosomal protein L13, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31203316-31205407 Nucleotide Length: 621 |
| Protein-coding | LOC_Os03g54890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g10340 LOC_Os03g37970 LOC_Os03g38000 LOC_Os01g19840 LOC_Os02g18550 LOC_Os02g27760 LOC_Os03g22180 LOC_Os01g54870 LOC_Os02g40880 LOC_Os01g67134 LOC_Os03g18570 More.. |
| Downstream Genes | LOC_Os06g02510 LOC_Os11g03400 LOC_Os04g42380 LOC_Os04g52361 LOC_Os12g03090 LOC_Os12g21798 LOC_Os05g28750 LOC_Os07g10720 LOC_Os07g08660 LOC_Os03g58430 LOC_Os08g10608 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g54890.1 |
| Rice Genome Annotation | LOC_Os03g54890.1 |
| Ricechip | LOC_Os03g54890.1 |
| KEGG | osa:4334154 dosa:Os03t0756000-01 |
| Entrez-Gene | 4334154 |