RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g54910.1 View Network Show in Genome Browser |
| Other Names | Os03g0756300 |
| Description | X8 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31216401-31218822 Nucleotide Length: 528 |
| Protein-coding | LOC_Os03g54910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0030246 | carbohydrate binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05620 LOC_Os02g41550 LOC_Os02g40010 LOC_Os02g36380 LOC_Os03g10190 LOC_Os01g37837 LOC_Os01g49290 LOC_Os03g53650 LOC_Os03g26090 LOC_Os03g11720 LOC_Os02g52920 More.. |
| Downstream Genes | LOC_Os07g30150 LOC_Os03g61100 LOC_Os12g39860 LOC_Os04g42520 LOC_Os08g23730 LOC_Os04g51630 LOC_Os12g40130 LOC_Os04g37920 LOC_Os08g13690 LOC_Os10g29470 LOC_Os03g57430 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g54910.1 |
| Rice Genome Annotation | LOC_Os03g54910.1 |
| Ricechip | LOC_Os03g54910.1 |
| KEGG | osa:4334157 dosa:Os03t0756300-01 |
| Entrez-Gene | 4334157 |