RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g55120.1 View Network Show in Genome Browser |
| Other Names | Os03g0758500 |
| Description | plastocyanin-like domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31359355-31360474 Nucleotide Length: 498 |
| Protein-coding | LOC_Os03g55120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g52280 LOC_Os01g09860 LOC_Os02g27960 LOC_Os02g16500 LOC_Os01g54080 LOC_Os03g18510 LOC_Os03g06940 LOC_Os03g49610 LOC_Os03g45920 LOC_Os02g57180 LOC_Os02g22480 More.. |
| Downstream Genes | LOC_Os06g11310 LOC_Os04g57750 LOC_Os05g46550 LOC_Os06g20370 LOC_Os09g32250 LOC_Os04g48160 LOC_Os06g15620 LOC_Os07g31840 LOC_Os12g25120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g55120.1 |
| Rice Genome Annotation | LOC_Os03g55120.1 |
| Ricechip | LOC_Os03g55120.1 |
| KEGG | osa:4334174 dosa:Os03t0758500-01 |
| Entrez-Gene | 4334174 |