RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g55200.1 View Network Show in Genome Browser |
| Other Names | Os03g0759500 |
| Description | ORC5 - Putative origin recognition complex subunit 5, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31410884-31413346 Nucleotide Length: 1575 |
| Protein-coding | LOC_Os03g55200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49010 LOC_Os01g63710 LOC_Os03g08640 LOC_Os01g36390 LOC_Os02g55410 LOC_Os02g03060 LOC_Os03g02680 LOC_Os03g01850 LOC_Os02g58220 LOC_Os03g13170 LOC_Os02g30800 More.. |
| Downstream Genes | LOC_Os10g26280 LOC_Os05g39850 LOC_Os06g08790 LOC_Os12g37400 LOC_Os11g29380 LOC_Os12g03130 LOC_Os11g03430 LOC_Os07g22400 LOC_Os05g14590 LOC_Os04g28090 LOC_Os05g29010 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g55200.1 |
| Rice Genome Annotation | LOC_Os03g55200.1 |
| Ricechip | LOC_Os03g55200.1 |
| KEGG | osa:4334180 dosa:Os03t0759500-01 |
| Entrez-Gene | 4334180 |