RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g55270.1 View Network Show in Genome Browser |
| Other Names | Os03g0760600 |
| Description | TIP41, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31454981-31458898 Nucleotide Length: 873 |
| Protein-coding | LOC_Os03g55270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49690 LOC_Os01g40340 LOC_Os01g23590 LOC_Os03g07150 LOC_Os02g12580 LOC_Os01g64280 LOC_Os01g73310 LOC_Os01g40370 |
| Downstream Genes | LOC_Os09g11230 LOC_Os10g27050 LOC_Os12g04290 LOC_Os05g51490 LOC_Os11g04520 LOC_Os12g01922 LOC_Os03g59060 LOC_Os04g52940 LOC_Os11g01872 LOC_Os06g05660 LOC_Os12g05810 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g55270.1 |
| Rice Genome Annotation | LOC_Os03g55270.1 |
| Ricechip | LOC_Os03g55270.1 |
| KEGG | osa:4334187 dosa:Os03t0760600-01 |
| Entrez-Gene | 4334187 |