RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g55410.1 View Network Show in Genome Browser |
| Other Names | Os03g0762300 |
| Description | peroxidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31526726-31528307 Nucleotide Length: 1005 |
| Protein-coding | LOC_Os03g55410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g22780 LOC_Os02g14929 LOC_Os03g42220 LOC_Os01g67090 LOC_Os03g08440 LOC_Os02g24612 LOC_Os02g10320 LOC_Os03g32630 |
| Downstream Genes | LOC_Os06g47320 LOC_Os06g36700 LOC_Os05g05470 LOC_Os04g46620 LOC_Os03g59020 LOC_Os06g34690 LOC_Os12g32380 LOC_Os11g41610 LOC_Os03g56241 LOC_Os05g48290 LOC_Os10g37060 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2102-5p |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5461 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g55410.1 |
| Rice Genome Annotation | LOC_Os03g55410.1 |
| Ricechip | LOC_Os03g55410.1 |
| KEGG | osa:4334200 dosa:Os03t0762300-01 |
| Entrez-Gene | 4334200 |