RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g55540.1 View Network Show in Genome Browser
Other Names	Os03g0764100
Description	ZOS3-18 - C2H2 zinc finger protein, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 31604952-31606236 Nucleotide Length: 810
Protein-coding	LOC_Os03g55540

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009790	embryo development	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0003676	nucleic acid binding	Molecular Function	IEA
GO:0003700	sequence-specific DNA binding transcription factor activity	Molecular Function	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g70790 LOC_Os02g12850 LOC_Os02g04130 LOC_Os03g51050 LOC_Os03g29350 LOC_Os03g08330 LOC_Os01g50420 LOC_Os03g13240 LOC_Os03g13250 LOC_Os01g04950 LOC_Os01g47730 More..
Downstream Genes	LOC_Os04g43680 LOC_Os11g37080 LOC_Os09g12800 LOC_Os07g19560 LOC_Os06g37000 LOC_Os07g42280 LOC_Os05g01940 LOC_Os07g48280 LOC_Os04g41960 LOC_Os07g01070 LOC_Os10g02240 More..

Database Links
Gramene	LOC_Os03g55540.1
Rice Genome Annotation	LOC_Os03g55540.1
Ricechip	LOC_Os03g55540.1
KEGG	osa:4334213 dosa:Os03t0764100-01
Entrez-Gene	4334213