RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g55620.1 View Network Show in Genome Browser |
| Other Names | Os03g0765000 |
| Description | CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31674568-31678720 Nucleotide Length: 930 |
| Protein-coding | LOC_Os03g55620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g16110 LOC_Os02g05630 LOC_Os02g55560 LOC_Os01g51200 LOC_Os02g15594 LOC_Os02g55340 LOC_Os01g38950 LOC_Os01g65230 LOC_Os02g13640 LOC_Os03g25070 LOC_Os02g49310 More.. |
| Downstream Genes | LOC_Os06g48300 LOC_Os06g33549 LOC_Os07g32380 LOC_Os04g56450 LOC_Os04g37904 LOC_Os11g01510 LOC_Os05g51560 LOC_Os09g30150 LOC_Os06g18830 LOC_Os04g52000 LOC_Os12g01520 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g55620.1 |
| Rice Genome Annotation | LOC_Os03g55620.1 |
| Ricechip | LOC_Os03g55620.1 |
| KEGG | osa:4334220 dosa:Os03t0765000-01 |
| Entrez-Gene | 4334220 |