RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g55720.1 View Network Show in Genome Browser |
| Other Names | Os03g0765900 |
| Description | cytochrome b6f complex subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31725102-31725900 Nucleotide Length: 357 |
| Protein-coding | LOC_Os03g55720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g49870 LOC_Os02g37060 LOC_Os03g03720 LOC_Os01g17170 LOC_Os02g09150 LOC_Os02g38210 LOC_Os03g21560 LOC_Os03g25960 LOC_Os02g44310 LOC_Os03g14450 LOC_Os03g17070 More.. |
| Downstream Genes | LOC_Os07g37030 LOC_Os07g32880 LOC_Os07g37240 LOC_Os07g36080 LOC_Os07g28610 LOC_Os04g46820 LOC_Os04g46810 LOC_Os04g38600 LOC_Os05g48630 LOC_Os10g41410 LOC_Os07g04840 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g55720.1 |
| Rice Genome Annotation | LOC_Os03g55720.1 |
| Ricechip | LOC_Os03g55720.1 |
| KEGG | osa:4334225 dosa:Os03t0765900-01 |
| Entrez-Gene | 4334225 |