RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g55730.1 View Network Show in Genome Browser |
| Other Names | Os03g0766000 |
| Description | SSA2 - 2S albumin seed storage family protein precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31725971-31732265 Nucleotide Length: 684 |
| Protein-coding | LOC_Os03g55730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g64680 LOC_Os02g14059 LOC_Os01g10820 LOC_Os03g03650 LOC_Os03g08450 LOC_Os01g15310 LOC_Os03g52400 |
| Downstream Genes | LOC_Os03g55734 LOC_Os07g22600 LOC_Os10g23120 LOC_Os08g42020 LOC_Os04g30890 LOC_Os06g35730 LOC_Os05g11710 LOC_Os11g05570 LOC_Os05g04850 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g55730.1 |
| Rice Genome Annotation | LOC_Os03g55730.1 |
| Ricechip | LOC_Os03g55730.1 |
| KEGG | osa:4334226 dosa:Os03t0766000-01 |
| Entrez-Gene | 4334226 |