RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g55820.1 View Network Show in Genome Browser |
| Other Names | Os03g0767500 |
| Description | thioredoxin, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31778271-31781418 Nucleotide Length: 789 |
| Protein-coding | LOC_Os03g55820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g53400 LOC_Os01g68480 LOC_Os02g35900 LOC_Os01g42960 LOC_Os03g17860 LOC_Os03g31490 LOC_Os01g29740 LOC_Os03g41080 LOC_Os03g10860 LOC_Os03g04120 LOC_Os01g62070 More.. |
| Downstream Genes | LOC_Os08g29110 LOC_Os04g35290 LOC_Os10g31000 LOC_Os09g23650 LOC_Os05g47930 LOC_Os04g53740 LOC_Os06g06790 LOC_Os08g13320 LOC_Os05g49380 LOC_Os09g39560 LOC_Os08g29780 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g55820.1 |
| Rice Genome Annotation | LOC_Os03g55820.1 |
| Ricechip | LOC_Os03g55820.1 |
| KEGG | osa:4334234 dosa:Os03t0767500-01 |
| Entrez-Gene | 4334234 |