RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g55970.1 View Network Show in Genome Browser |
| Other Names | Os03g0769600 |
| Description | uncharacterized protein ycf44, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 31860449-31863401 Nucleotide Length: 1695 |
| Protein-coding | LOC_Os03g55970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g14040 LOC_Os03g53710 LOC_Os02g43600 LOC_Os02g38240 LOC_Os03g36540 LOC_Os03g08790 LOC_Os01g54540 LOC_Os03g55930 LOC_Os03g03020 LOC_Os02g42380 LOC_Os01g58470 More.. |
| Downstream Genes | LOC_Os06g46434 LOC_Os09g26810 LOC_Os08g25900 LOC_Os09g24530 LOC_Os03g61030 LOC_Os06g20320 LOC_Os07g30670 LOC_Os07g34950 LOC_Os06g43900 LOC_Os12g04220 LOC_Os05g01110 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g55970.1 |
| Rice Genome Annotation | LOC_Os03g55970.1 |
| Ricechip | LOC_Os03g55970.1 |
| KEGG | osa:4334251 dosa:Os03t0769600-01 |
| Entrez-Gene | 4334251 |