RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g56310.1 View Network Show in Genome Browser |
| Other Names | Os03g0774300 |
| Description | 5-nucleotidase domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 32096847-32104074 Nucleotide Length: 1710 |
| Protein-coding | LOC_Os03g56310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g08364 LOC_Os02g11670 LOC_Os01g53420 LOC_Os01g53380 LOC_Os02g01510 LOC_Os03g05300 LOC_Os02g07060 LOC_Os01g53370 LOC_Os02g36974 LOC_Os02g02410 LOC_Os03g31550 More.. |
| Downstream Genes | LOC_Os08g10570 LOC_Os08g23730 LOC_Os07g49270 LOC_Os04g51690 LOC_Os05g08950 LOC_Os04g50660 LOC_Os04g49580 LOC_Os06g15990 LOC_Os09g16090 LOC_Os07g30610 LOC_Os06g18790 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1854-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g56310.1 |
| Rice Genome Annotation | LOC_Os03g56310.1 |
| Ricechip | LOC_Os03g56310.1 |
| KEGG | osa:4334277 dosa:Os03t0774300-01 |
| Entrez-Gene | 4334277 |