RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g56460.3 View Network Show in Genome Browser |
| Other Names | Os03g0776000 |
| Description | glucose-6-phosphate isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 32175462-32182101 Nucleotide Length: 1521 |
| Protein-coding | LOC_Os03g56460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g73310 LOC_Os03g18220 LOC_Os01g67860 LOC_Os01g51380 LOC_Os01g53680 LOC_Os02g38920 LOC_Os01g09460 LOC_Os01g64660 LOC_Os02g07260 LOC_Os03g27290 LOC_Os01g52450 More.. |
| Downstream Genes | LOC_Os09g30418 LOC_Os09g30412 LOC_Os09g20820 LOC_Os08g39140 LOC_Os05g01600 LOC_Os05g09500 LOC_Os06g37180 LOC_Os05g45590 LOC_Os11g06390 LOC_Os05g39310 LOC_Os05g39320 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5156 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g56460.3 |
| Rice Genome Annotation | LOC_Os03g56460.3 |
| Ricechip | LOC_Os03g56460.3 |
| KEGG | osa:4334290 dosa:Os03t0776000-01 |
| Entrez-Gene | 4334290 |