RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g56800.2 View Network Show in Genome Browser |
| Other Names | Os03g0780500 |
| Description | CBS domain containing membrane protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 32365742-32371274 Nucleotide Length: 1479 |
| Protein-coding | LOC_Os03g56800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g69970 LOC_Os02g49270 LOC_Os01g04260 LOC_Os02g13530 LOC_Os01g52490 LOC_Os01g67134 LOC_Os02g57590 LOC_Os03g40110 LOC_Os03g18570 LOC_Os03g18580 LOC_Os03g29170 More.. |
| Downstream Genes | LOC_Os08g23730 LOC_Os03g60930 LOC_Os09g37860 LOC_Os05g01990 LOC_Os05g26660 LOC_Os03g58720 LOC_Os06g36160 LOC_Os04g50660 LOC_Os05g08360 LOC_Os07g10350 LOC_Os10g42320 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2920 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g56800.2 |
| Rice Genome Annotation | LOC_Os03g56800.2 |
| Ricechip | LOC_Os03g56800.2 |
| KEGG | osa:4334308 dosa:Os03t0780500-01 |
| Entrez-Gene | 4334308 |