RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g56840.1 View Network Show in Genome Browser |
| Other Names | Os03g0781000 |
| Description | GTP-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 32384812-32388231 Nucleotide Length: 1296 |
| Protein-coding | LOC_Os03g56840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22610 LOC_Os01g41030 LOC_Os03g41612 LOC_Os01g49900 LOC_Os01g52530 LOC_Os02g03540 LOC_Os03g15870 LOC_Os02g48390 LOC_Os03g22160 LOC_Os01g54540 LOC_Os03g17580 More.. |
| Downstream Genes | LOC_Os05g47630 LOC_Os05g51800 LOC_Os05g18750 LOC_Os06g41360 LOC_Os03g59640 LOC_Os06g22690 LOC_Os08g19850 LOC_Os12g35630 LOC_Os05g01270 LOC_Os12g42370 LOC_Os11g38020 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5825 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g56840.1 |
| Rice Genome Annotation | LOC_Os03g56840.1 |
| Ricechip | LOC_Os03g56840.1 |
| KEGG | osa:9269534 dosa:Os03t0781000-01 |
| Entrez-Gene | 9269534 |