RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g57040.2 View Network Show in Genome Browser |
| Other Names | Os03g0783700 |
| Description | clathrin adaptor complex small chain domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 32513607-32515613 Nucleotide Length: 486 |
| Protein-coding | LOC_Os03g57040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g50770 LOC_Os03g23950 LOC_Os02g56110 LOC_Os02g21250 LOC_Os03g02720 LOC_Os01g62230 LOC_Os01g05610 LOC_Os01g05630 LOC_Os01g05970 LOC_Os01g05900 LOC_Os01g06010 More.. |
| Downstream Genes | LOC_Os05g46550 LOC_Os06g07090 LOC_Os05g38610 LOC_Os12g10560 LOC_Os08g38300 LOC_Os05g49860 LOC_Os12g25120 LOC_Os08g33100 LOC_Os07g36130 LOC_Os12g06670 LOC_Os07g36140 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR156l-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g57040.2 |
| Rice Genome Annotation | LOC_Os03g57040.2 |
| Ricechip | LOC_Os03g57040.2 |
| KEGG | osa:4334331 dosa:Os03t0783700-00 |
| Entrez-Gene | 4334331 |