RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os03g57280.1 View Network Show in Genome Browser |
| Other Names | Os03g0786700 |
| Description | N-dimethylguanosine tRNA methyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr3 CDS Coordinates (5'-3'): 32665994-32671254 Nucleotide Length: 1827 |
| Protein-coding | LOC_Os03g57280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g33030 LOC_Os03g22320 LOC_Os03g19960 LOC_Os01g43020 LOC_Os03g05720 LOC_Os03g02420 LOC_Os03g51900 LOC_Os02g26850 LOC_Os02g02360 LOC_Os02g37870 LOC_Os01g33050 More.. |
| Downstream Genes | LOC_Os04g53770 LOC_Os07g25440 LOC_Os06g43690 LOC_Os12g07300 LOC_Os12g36950 LOC_Os07g34740 LOC_Os11g07500 LOC_Os08g05880 LOC_Os12g29660 LOC_Os12g04010 LOC_Os10g35280 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5834 |
| Database Links | |
|---|---|
| Gramene | LOC_Os03g57280.1 |
| Rice Genome Annotation | LOC_Os03g57280.1 |
| Ricechip | LOC_Os03g57280.1 |
| KEGG | osa:4334353 dosa:Os03t0786700-01 |
| Entrez-Gene | 4334353 |