RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os03g57290.1 View Network Show in Genome Browser
Other Names	Os03g0786800
Description	cullin, putative, expressed
Gene Attributes	Chromosome: Chr3 CDS Coordinates (5'-3'): 32672049-32679017 Nucleotide Length: 2511
Protein-coding	LOC_Os03g57290

Gene Ontology Classification
GO	Name	Type	Code
GO:0007049	cell cycle	Biological Process	IEA
GO:0006259	DNA metabolic process	Biological Process	IEA
GO:0009790	embryo development	Biological Process	IEA
GO:0009908	flower development	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005622	intracellular	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g07120 LOC_Os02g47870 LOC_Os03g48140 LOC_Os01g59800 LOC_Os01g04870 LOC_Os03g51550 LOC_Os03g10990 LOC_Os01g27160 LOC_Os02g26984
Downstream Genes	LOC_Os05g51480 LOC_Os04g40830 LOC_Os09g21760 LOC_Os08g04270 LOC_Os06g29350 LOC_Os08g04290 LOC_Os11g26910

miRNA Regulations
miRNAs	osa-miR816

Database Links
Gramene	LOC_Os03g57290.1
Rice Genome Annotation	LOC_Os03g57290.1
Ricechip	LOC_Os03g57290.1
KEGG	osa:4334354 dosa:Os03t0786800-01
Entrez-Gene	4334354